Orthogroup:group_344


Homologs in group_344

Help

8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11985 FBDBKF_11985 Morganella morganii S1 dppB dipeptide ABC transporter permease DppB
FBDBKF_20665 FBDBKF_20665 Morganella morganii S1 dppB Dipeptide transporter permease DppB
EHELCC_14320 EHELCC_14320 Morganella morganii S2 dppB dipeptide ABC transporter permease DppB
NLDBIP_15415 NLDBIP_15415 Morganella morganii S4 dppB dipeptide ABC transporter permease DppB
LHKJJB_15195 LHKJJB_15195 Morganella morganii S3 dppB dipeptide ABC transporter permease DppB
HKOGLL_14315 HKOGLL_14315 Morganella morganii S5 dppB dipeptide ABC transporter permease DppB
F4V73_RS14670 F4V73_RS14670 Morganella psychrotolerans dppB dipeptide ABC transporter permease DppB
PMI_RS14060 PMI_RS14060 Proteus mirabilis HI4320 dppB dipeptide ABC transporter permease DppB

Distribution of group_344 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_344 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_344

Orthogroup content: 8 members

Help

This page summarizes the annotation of all members of the orthologous group group_344.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dppB 8

Product

# Product Occurence
1 dipeptide ABC transporter permease DppB 7
2 Dipeptide transporter permease DppB 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0601 8 EP Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 ABC-type dipeptide/oligopeptide/nickel transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12369 7 dipeptide transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 8 Binding-protein-dependent transport system inner membrane component
PF19300 7 Binding-prot-dependent transport system membrane comp, N-term

Annotations of the 76 SwissProt hits

Annotation Number of occurrences
Di/tripeptide transport system permease protein DppB 1
Di/tripeptide transport system permease protein DppC 1
Dipeptide transport system permease protein DppB 7
Dipeptide transport system permease protein DppC 1
Glutathione transport system permease protein GsiC 16
Inner membrane ABC transporter permease protein YejB 2
Metal-staphylopine import system permease protein CntB 2
Nickel import system permease protein NikB 9
Nickel transport system permease protein NikB 1
Oligopeptide transport system permease protein AmiC 2
Oligopeptide transport system permease protein AppB 1
Oligopeptide transport system permease protein OppB 11
Peptide transport system permease protein SapB 4
Peptidoglycan transport system permease protein YejB 1
Probable D,D-dipeptide transport system permease protein DdpB 1
Probable peptide ABC transporter permease protein y4tP 1
Putative peptide permease protein BMEII0860 1
Putative peptide permease protein BOV_A0351 1
Putative peptide permease protein BRA0408/BS1330_II0405 1
Putative peptide transport permease protein MT1320 1
Putative peptide transport permease protein Mb1314c 1
Putative peptide transport permease protein Rv1283c 1
Putative peptide transport system permease protein BAB2_1050 1
Putative peptide transport system permease protein BAB2_1051 1
Putative peptide transport system permease protein BMEII0207/BMEII0208 1
Putative peptide transport system permease protein BMEII0209 1
Putative peptide transport system permease protein BRA1092/BS1330_II1084 1
Putative peptide transport system permease protein BRA1093/BS1330_II1085 1
Putative peptide transport system permease protein BruAb2_1031 1
Putative peptide transport system permease protein BruAb2_1032 1
Putrescine export system permease protein SapB 1

Protein length

Min length 66
Max length 339
Mean length (sd) 304.9 (96.5)
Median length 339.0

Protein length distribution