PF13391


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13391, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13391
Description HNH endonuclease

Occurence in the database

PF13391 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3514 FBDBKF_18035 6726 7598 -1 putative restriction endonuclease Morganella morganii S1
1 group_3514 EHELCC_16735 6726 7598 -1 putative restriction endonuclease Morganella morganii S2
2 group_3514 NLDBIP_17715 48168 49040 1 putative restriction endonuclease Morganella morganii S4
3 group_3514 LHKJJB_17635 48168 49040 1 putative restriction endonuclease Morganella morganii S3
4 group_3514 HKOGLL_17450 48168 49040 1 putative restriction endonuclease Morganella morganii S5
5 group_3993 F4V73_RS02225 468829 469680 -1 HNH endonuclease signature motif containing protein Morganella psychrotolerans