PF13332


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13332, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13332
Description Hemagglutinin repeat

Occurence in the database

PF13332 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1783 FBDBKF_13000 100290 104924 -1 Hemolysin Morganella morganii S1
1 group_2912 FBDBKF_13640 105360 109019 -1 DUF637 domain-containing protein Morganella morganii S1
2 group_1783 EHELCC_06315 270322 274956 -1 Hemolysin Morganella morganii S2
3 group_1783 NLDBIP_06635 311387 316021 -1 Hemolysin Morganella morganii S4
4 group_1783 LHKJJB_03515 288911 293545 -1 Hemolysin Morganella morganii S3
5 group_1783 HKOGLL_06990 210775 215409 -1 Hemolysin Morganella morganii S5
6 group_3732 F4V73_RS12485 78756 82223 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans
7 group_3732 F4V73_RS12495 82783 90567 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans
8 group_1783 F4V73_RS16185 40653 45293 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans
9 group_1783 PMI_RS10140 2214966 2219699 1 hpmA calcium-independent hemolysin HpmA Proteus mirabilis HI4320