PF12797


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12797, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF12797
Description 4Fe-4S binding domain

Occurence in the database

PF12797 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_21 FBDBKF_10455 48339 48956 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S1
1 group_21 EHELCC_14790 48329 48946 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S2
2 group_21 NLDBIP_14620 48329 48946 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S4
3 group_21 LHKJJB_14725 92780 93397 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S3
4 group_21 HKOGLL_13345 92780 93397 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S5
5 group_21 F4V73_RS14155 46639 47256 1 DMSO/selenate family reductase complex B subunit Morganella psychrotolerans