PF12557


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12557, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF12557
Description Cob(I)alamin adenosyltransferase N terminal

Occurence in the database

PF12557 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2342 FBDBKF_18800 7544 8134 1 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase Morganella morganii S1
1 group_2342 EHELCC_16995 7545 8135 1 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase Morganella morganii S2
2 group_2342 NLDBIP_18375 7544 8134 1 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase Morganella morganii S4
3 group_2342 LHKJJB_09250 184195 184785 -1 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase Morganella morganii S3
4 group_2342 HKOGLL_08800 184195 184785 -1 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase Morganella morganii S5
5 group_2342 F4V73_RS13795 391932 392522 -1 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase Morganella psychrotolerans
6 group_2342 PMI_RS06455 1416680 1417270 1 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase Proteus mirabilis HI4320