PF11876


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11876, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11876
Description Type VI immunity for VRR-NUC

Occurence in the database

PF11876 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_167 FBDBKF_16700 20512 21690 -1 DUF3396 domain-containing protein Morganella morganii S1
1 group_167 FBDBKF_16710 22002 23180 -1 DUF3396 domain-containing protein Morganella morganii S1
2 group_167 EHELCC_10750 190591 191769 1 DUF3396 domain-containing protein Morganella morganii S2
3 group_167 EHELCC_10760 192081 193259 1 DUF3396 domain-containing protein Morganella morganii S2
4 group_167 NLDBIP_11095 168862 170040 1 DUF3396 domain-containing protein Morganella morganii S4
5 group_167 NLDBIP_11105 170352 171530 1 DUF3396 domain-containing protein Morganella morganii S4
6 group_167 LHKJJB_10250 19998 21176 -1 DUF3396 domain-containing protein Morganella morganii S3
7 group_167 LHKJJB_10260 21488 22666 -1 DUF3396 domain-containing protein Morganella morganii S3
8 group_167 HKOGLL_16415 20007 21185 -1 DUF3396 domain-containing protein Morganella morganii S5
9 group_167 HKOGLL_16425 21497 22675 -1 DUF3396 domain-containing protein Morganella morganii S5