Orthogroup:group_153


Homologs in group_153

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10 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07560 FBDBKF_07560 Morganella morganii S1 eutM ethanolamine utilization microcompartment protein EutM
EHELCC_17230 EHELCC_17230 Morganella morganii S2 eutM ethanolamine utilization microcompartment protein EutM
NLDBIP_13835 NLDBIP_13835 Morganella morganii S4 eutM ethanolamine utilization microcompartment protein EutM
LHKJJB_09015 LHKJJB_09015 Morganella morganii S3 eutM ethanolamine utilization microcompartment protein EutM
HKOGLL_08565 HKOGLL_08565 Morganella morganii S5 eutM ethanolamine utilization microcompartment protein EutM
F4V73_RS13560 F4V73_RS13560 Morganella psychrotolerans eutM ethanolamine utilization microcompartment protein EutM
PMI_RS13375 PMI_RS13375 Proteus mirabilis HI4320 - BMC domain-containing protein
PMI_RS13405 PMI_RS13405 Proteus mirabilis HI4320 - BMC domain-containing protein
PMI_RS13410 PMI_RS13410 Proteus mirabilis HI4320 - BMC domain-containing protein
PMI_RS13415 PMI_RS13415 Proteus mirabilis HI4320 - BMC domain-containing protein

Distribution of group_153 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_153 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_153

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_153.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 eutM 6
2 - 4

Product

# Product Occurence
1 ethanolamine utilization microcompartment protein EutM 6
2 BMC domain-containing protein 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4577 10 QC Secondary metabolites biosynthesis, transport and catabolism (Q)
Energy production and conversion (C)		 Carboxysome shell and ethanolamine utilization microcompartment protein CcmL/EutN

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04027 9 ethanolamine utilization protein EutM - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00936 10 BMC domain

Annotations of the 43 SwissProt hits

Annotation Number of occurrences
Bacterial microcompartment protein homohexamer 1
Bacterial microcompartment shell protein EutK 2
Bacterial microcompartment shell protein EutM 4
Bacterial microcompartment shell protein PduA 3
Bacterial microcompartment shell protein PduJ 2
Bacterial microcompartment shell protein PduK 2
Bacterial microcompartment shell protein PduT 2
Carboxysome assembly protein CcmO 3
Carboxysome shell protein CcmK 1
Carboxysome shell protein CcmK1 2
Carboxysome shell protein CcmK2 3
Carboxysome shell protein CcmK3 3
Carboxysome shell protein CcmK4 3
Carboxysome shell protein CsoS1 4
Carboxysome shell protein CsoS1A 1
Carboxysome shell protein CsoS1B 2
Carboxysome shell protein CsoS1C 2
Major carboxysome shell protein CsoS1 1
Major carboxysome shell protein CsoS1A 1
Probable carboxysome shell protein CsoS1E 1

Protein length

Min length 92
Max length 168
Mean length (sd) 102.8 (23.0)
Median length 97.0

Protein length distribution