PF11756


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11756, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11756
Description Nitrous oxide-stimulated promoter

Occurence in the database

PF11756 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1650 FBDBKF_10970 18654 19010 -1 nitrous oxide-stimulated promoter family protein Morganella morganii S1
1 group_1650 EHELCC_05255 40458 40814 1 nitrous oxide-stimulated promoter family protein Morganella morganii S2
2 group_1650 NLDBIP_05575 81523 81879 1 nitrous oxide-stimulated promoter family protein Morganella morganii S4
3 group_1650 LHKJJB_02455 59047 59403 1 nitrous oxide-stimulated promoter family protein Morganella morganii S3
4 group_1650 HKOGLL_15835 82487 82843 1 nitrous oxide-stimulated promoter family protein Morganella morganii S5
5 group_1650 F4V73_RS08255 1714184 1714531 1 nitrous oxide-stimulated promoter family protein Morganella psychrotolerans
6 group_1650 PMI_RS09655 2106825 2107172 1 nitrous oxide-stimulated promoter family protein Proteus mirabilis HI4320