Homologs in group_1650

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10970 FBDBKF_10970 62.6 Morganella morganii S1 - nitrous oxide-stimulated promoter family protein
EHELCC_05255 EHELCC_05255 62.6 Morganella morganii S2 - nitrous oxide-stimulated promoter family protein
NLDBIP_05575 NLDBIP_05575 62.6 Morganella morganii S4 - nitrous oxide-stimulated promoter family protein
LHKJJB_02455 LHKJJB_02455 62.6 Morganella morganii S3 - nitrous oxide-stimulated promoter family protein
HKOGLL_15835 HKOGLL_15835 62.6 Morganella morganii S5 - nitrous oxide-stimulated promoter family protein
F4V73_RS08255 F4V73_RS08255 68.1 Morganella psychrotolerans - nitrous oxide-stimulated promoter family protein

Distribution of the homologs in the orthogroup group_1650

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1650

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25728 7.96e-50 157 67 1 109 4 ygbA Uncharacterized protein YgbA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09655
Feature type CDS
Gene -
Product nitrous oxide-stimulated promoter family protein
Location 2106825 - 2107172 (strand: 1)
Length 348 (nucleotides) / 115 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1650
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11756 Nitrous oxide-stimulated promoter

Protein Sequence

MSGKRINREKQTIQKMVALYERAHPNTDPEYYQQLVTYAYKRLDKCRYGEEKPACKQCPIHCYQPVKRAAMKQVMRWAGPRMLIYHPYLAIRHLIDDKKPVPALPAKKSKRLSGK

Flanking regions ( +/- flanking 50bp)

GCGTTATGATAAAATGCATTTTAAATGCAACAATAAGAAGTGAGAGTACCATGTCAGGTAAAAGAATTAATCGAGAGAAGCAAACCATCCAAAAAATGGTTGCTCTGTATGAACGAGCGCATCCTAATACCGACCCCGAGTATTATCAGCAATTAGTGACATATGCTTATAAAAGACTAGATAAATGTCGCTATGGTGAGGAAAAACCCGCCTGCAAACAATGCCCAATTCACTGCTATCAGCCAGTAAAAAGAGCAGCAATGAAACAAGTCATGCGTTGGGCGGGGCCTCGAATGCTAATTTATCATCCCTATTTAGCAATTAGGCATCTTATTGATGATAAGAAACCCGTTCCTGCATTACCGGCTAAAAAATCTAAACGTTTATCGGGAAAATAAAGTCTGCTTTTTTTAATCGGTATAATACATGTTGTGCTAAAGGGTGTGTT