PF11319


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11319, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11319
Description Type VI secretion system VasI, EvfG, VC_A0118

Occurence in the database

PF11319 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_552 FBDBKF_01345 261831 262478 1 vasI type VI secretion system-associated protein VasI Morganella morganii S1
1 group_552 EHELCC_00200 46390 47037 -1 vasI type VI secretion system-associated protein VasI Morganella morganii S2
2 group_552 NLDBIP_03260 633099 633746 1 vasI type VI secretion system-associated protein VasI Morganella morganii S4
3 group_552 LHKJJB_04775 240340 240987 1 vasI type VI secretion system-associated protein VasI Morganella morganii S3
4 group_552 HKOGLL_02270 46595 47242 -1 vasI type VI secretion system-associated protein VasI Morganella morganii S5
5 group_552 F4V73_RS02325 493597 494244 -1 vasI type VI secretion system-associated protein VasI Morganella psychrotolerans
6 group_552 PMI_RS03630 816495 817145 -1 vasI type VI secretion system-associated protein VasI Proteus mirabilis HI4320