Orthogroup:group_625


Homologs in group_625

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02005 FBDBKF_02005 Morganella morganii S1 argS arginine--tRNA ligase
EHELCC_02475 EHELCC_02475 Morganella morganii S2 argS arginine--tRNA ligase
NLDBIP_00985 NLDBIP_00985 Morganella morganii S4 argS arginine--tRNA ligase
LHKJJB_01050 LHKJJB_01050 Morganella morganii S3 argS arginine--tRNA ligase
HKOGLL_01090 HKOGLL_01090 Morganella morganii S5 argS arginine--tRNA ligase
F4V73_RS04370 F4V73_RS04370 Morganella psychrotolerans argS arginine--tRNA ligase
PMI_RS05350 PMI_RS05350 Proteus mirabilis HI4320 argS arginine--tRNA ligase

Distribution of group_625 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_625 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_625

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_625.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 argS 7

Product

# Product Occurence
1 arginine--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0018 7 J Translation, ribosomal structure and biogenesis (J) Arginyl-tRNA synthetase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01887 7 arginyl-tRNA synthetase [EC:6.1.1.19] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00750 7 tRNA synthetases class I (R)
PF03485 7 Arginyl tRNA synthetase N terminal domain
PF05746 7 DALR anticodon binding domain

Annotations of the 541 SwissProt hits

Annotation Number of occurrences
Arginine--tRNA ligase 512
Arginine--tRNA ligase 1 4
Arginine--tRNA ligase 2 4
Arginine--tRNA ligase, chloroplastic/mitochondrial 1
Arginine--tRNA ligase, cytoplasmic 10
Arginine--tRNA ligase, mitochondrial 1
Probable arginine--tRNA ligase, cytoplasmic 4
Probable arginine--tRNA ligase, mitochondrial 5

Protein length

Unique protein length 576

Protein length distribution