PF10820


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10820, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10820
Description Protein of unknown function (DUF2543)

Occurence in the database

PF10820 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3119 FBDBKF_19785 2926 3171 -1 DUF2543 domain-containing protein Morganella morganii S1
1 group_3119 EHELCC_10510 149620 149865 -1 DUF2543 domain-containing protein Morganella morganii S2
2 group_3119 NLDBIP_10855 127891 128136 -1 DUF2543 domain-containing protein Morganella morganii S4
3 group_3119 LHKJJB_10500 63392 63637 1 DUF2543 domain-containing protein Morganella morganii S3
4 group_3119 HKOGLL_16665 63401 63646 1 DUF2543 domain-containing protein Morganella morganii S5
5 group_3119 F4V73_RS11035 344547 344792 -1 DUF2543 family protein Morganella psychrotolerans