PF10777


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10777, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10777
Description Inner membrane protein YlaC

Occurence in the database

PF10777 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_489 FBDBKF_00845 154227 154736 1 ylaC Inner membrane protein ylaC Morganella morganii S1
1 group_489 EHELCC_00700 154132 154641 -1 ylaC Inner membrane protein ylaC Morganella morganii S2
2 group_489 NLDBIP_02760 525495 526004 1 ylaC Inner membrane protein ylaC Morganella morganii S4
3 group_489 LHKJJB_04275 132736 133245 1 ylaC Inner membrane protein ylaC Morganella morganii S3
4 group_489 HKOGLL_02770 154337 154846 -1 ylaC Inner membrane protein ylaC Morganella morganii S5
5 group_489 F4V73_RS06835 1419150 1419659 1 YlaC family protein Morganella psychrotolerans
6 group_489 PMI_RS08185 1790508 1791014 1 YlaC family protein Proteus mirabilis HI4320