Orthogroup:group_566


Homologs in group_566

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01465 FBDBKF_01465 Morganella morganii S1 trmN6 tRNA1(Val) A37 N6-methylase TrmN6
EHELCC_00080 EHELCC_00080 Morganella morganii S2 trmN6 tRNA1(Val) A37 N6-methylase TrmN6
NLDBIP_03380 NLDBIP_03380 Morganella morganii S4 trmN6 tRNA1(Val) A37 N6-methylase TrmN6
LHKJJB_04895 LHKJJB_04895 Morganella morganii S3 trmN6 tRNA1(Val) A37 N6-methylase TrmN6
HKOGLL_02150 HKOGLL_02150 Morganella morganii S5 trmN6 tRNA1(Val) A37 N6-methylase TrmN6
F4V73_RS01940 F4V73_RS01940 Morganella psychrotolerans - tRNA1(Val) (adenine(37)-N6)-methyltransferase
PMI_RS09355 PMI_RS09355 Proteus mirabilis HI4320 - tRNA1(Val) (adenine(37)-N6)-methyltransferase

Distribution of group_566 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_566 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_566

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_566.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trmN6 5
2 - 2

Product

# Product Occurence
1 tRNA1(Val) A37 N6-methylase TrmN6 5
2 tRNA1(Val) (adenine(37)-N6)-methyltransferase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4123 7 J Translation, ribosomal structure and biogenesis (J) tRNA1(Val) A37 N6-methylase TrmN6

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K15460 7 tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05175 7 Methyltransferase small domain

Annotations of the 239 SwissProt hits

Annotation Number of occurrences
Bifunctional methyltransferase 5
Glycine/sarcosine N-methyltransferase 1
MTRF1L release factor glutamine methyltransferase 2
Probable RNA methyltransferase YabB 1
Putative protein N5-glutamine methyltransferase MJ0928 1
Release factor glutamine methyltransferase 43
Ribosomal RNA large subunit methyltransferase K/L 1
Ribosomal RNA small subunit methyltransferase C 24
Ribosomal protein L11 methyltransferase 4
Ribosomal protein uL3 glutamine methyltransferase 20
Uncharacterized RNA methyltransferase CPn_0885/CP_0981/CPj0885/CpB0914 1
Uncharacterized RNA methyltransferase CTC_01941 1
Uncharacterized RNA methyltransferase TTE1797 1
Uncharacterized methyltransferase MT0098 1
Uncharacterized methyltransferase Mb0092 1
Uncharacterized methyltransferase Rv0089 1
Uncharacterized protein MG259 1
Uncharacterized protein YbxB 1
tRNA (uracil-5-)-methyltransferase homolog A 1
tRNA1(Val) (adenine(37)-N6)-methyltransferase 128

Protein length

Min length 247
Max length 252
Mean length (sd) 247.7 (1.9)
Median length 247.0

Protein length distribution