PF10689


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10689, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10689
Description Protein of unknown function (DUF2496)

Occurence in the database

PF10689 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2128 FBDBKF_15990 52541 52705 -1 rsmS pleiotropic regulatory protein RsmS Morganella morganii S1
1 group_2128 EHELCC_18595 9975 10139 -1 rsmS pleiotropic regulatory protein RsmS Morganella morganii S2
2 group_2128 NLDBIP_17425 39980 40144 -1 rsmS pleiotropic regulatory protein RsmS Morganella morganii S4
3 group_2128 LHKJJB_17235 16044 16208 1 rsmS pleiotropic regulatory protein RsmS Morganella morganii S3
4 group_2128 HKOGLL_17160 39980 40144 -1 rsmS pleiotropic regulatory protein RsmS Morganella morganii S5
5 group_2128 F4V73_RS16320 77589 77753 1 rsmS pleiotropic regulatory protein RsmS Morganella psychrotolerans
6 group_2128 PMI_RS18805 170958 171113 -1 rsmS pleiotropic regulatory protein RsmS Proteus mirabilis HI4320