PF10625


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10625, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10625
Description Universal stress protein B (UspB)

Occurence in the database

PF10625 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1584 FBDBKF_10335 21406 21741 1 uspB universal stress protein UspB Morganella morganii S1
1 group_1584 EHELCC_14670 21396 21731 1 uspB universal stress protein UspB Morganella morganii S2
2 group_1584 NLDBIP_14500 21396 21731 1 uspB universal stress protein UspB Morganella morganii S4
3 group_1584 LHKJJB_14845 119995 120330 -1 uspB universal stress protein UspB Morganella morganii S3
4 group_1584 HKOGLL_13465 119995 120330 -1 uspB universal stress protein UspB Morganella morganii S5
5 group_1584 F4V73_RS14035 17394 17729 1 uspB universal stress protein UspB Morganella psychrotolerans
6 group_1584 PMI_RS14885 3304168 3304500 1 uspB universal stress protein UspB Proteus mirabilis HI4320