PF10617


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10617, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10617
Description Protein of unknown function (DUF2474)

Occurence in the database

PF10617 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_599 FBDBKF_01800 48130 48309 -1 DUF2474 domain-containing protein Morganella morganii S1
1 group_599 EHELCC_02270 435950 436129 -1 DUF2474 domain-containing protein Morganella morganii S2
2 group_599 NLDBIP_01190 244007 244186 1 DUF2474 domain-containing protein Morganella morganii S4
3 group_599 LHKJJB_00845 148499 148678 -1 DUF2474 domain-containing protein Morganella morganii S3
4 group_599 HKOGLL_00885 154010 154189 -1 DUF2474 domain-containing protein Morganella morganii S5
5 group_599 F4V73_RS04125 872392 872553 -1 DUF2474 domain-containing protein Morganella psychrotolerans
6 group_599 PMI_RS18980 1520710 1520871 1 DUF2474 domain-containing protein Proteus mirabilis HI4320
7 group_4550 PMI_RS11750 2596665 2596844 -1 DUF2474 domain-containing protein Proteus mirabilis HI4320