PF10397


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10397, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10397
Description Adenylosuccinate lyase C-terminus

Occurence in the database

PF10397 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_254 FBDBKF_03785 159935 161305 -1 purB Adenylosuccinate lyase Morganella morganii S1
1 group_254 EHELCC_06750 85798 87168 1 purB Adenylosuccinate lyase Morganella morganii S2
2 group_254 NLDBIP_07075 85671 87041 1 purB Adenylosuccinate lyase Morganella morganii S4
3 group_254 LHKJJB_06610 49417 50787 1 purB Adenylosuccinate lyase Morganella morganii S3
4 group_254 HKOGLL_04320 182600 183970 -1 purB Adenylosuccinate lyase Morganella morganii S5
5 group_254 F4V73_RS11085 355260 356630 1 adenylosuccinate lyase family protein Morganella psychrotolerans
6 group_254 PMI_RS03090 680327 681694 1 purB adenylosuccinate lyase Proteus mirabilis HI4320
7 group_254 PMI_RS14740 3269739 3271109 -1 adenylosuccinate lyase family protein Proteus mirabilis HI4320