PF10396


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF10396
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF10396
Description GTP-binding protein TrmE N-terminus

Occurence in the database

PF10396 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2126 FBDBKF_15605 51682 53067 1 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE Morganella morganii S1
1 group_2126 EHELCC_15965 50982 52367 1 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE Morganella morganii S2
2 group_2126 NLDBIP_16405 28296 29681 -1 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE Morganella morganii S4
3 group_2126 LHKJJB_16400 50982 52367 1 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE Morganella morganii S3
4 group_2126 HKOGLL_16170 50982 52367 1 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE Morganella morganii S5
5 group_2126 F4V73_RS17550 144940 146304 -1 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE Morganella psychrotolerans
6 group_2126 PMI_RS15480 3441208 3442572 -1 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE Proteus mirabilis HI4320