PF10043


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10043, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10043
Description Predicted periplasmic lipoprotein (DUF2279)

Occurence in the database

PF10043 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1576 FBDBKF_10215 138678 139019 1 yfiM YfiM family lipoprotein Morganella morganii S1
1 group_1576 EHELCC_05015 330643 330984 1 yfiM YfiM family lipoprotein Morganella morganii S2
2 group_1576 NLDBIP_05015 330439 330780 1 yfiM YfiM family lipoprotein Morganella morganii S4
3 group_1576 LHKJJB_13615 4598 4939 -1 yfiM YfiM family lipoprotein Morganella morganii S3
4 group_1576 HKOGLL_12920 139459 139800 1 yfiM YfiM family lipoprotein Morganella morganii S5
5 group_1576 PMI_RS01950 458689 459036 -1 YfiM family lipoprotein Proteus mirabilis HI4320