PF09718


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF09718, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 17 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF09718
Description Lambda phage tail tape-measure protein (Tape_meas_lam_C)

Occurence in the database

PF09718 is associated with 17 different proteins (see tab "Protein list" and "Profile")
The 17 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_126 FBDBKF_13065 6870 9794 -1 Phage tail length tape-measure protein 1 Morganella morganii S1
1 group_3558 FBDBKF_18585 5977 8943 -1 Phage-related minor tail protein Morganella morganii S1
2 group_3558 EHELCC_15160 5977 8943 -1 Phage-related minor tail protein Morganella morganii S2
3 group_126 EHELCC_19810 63 1694 1 hypothetical protein Morganella morganii S2
4 group_126 EHELCC_19850 63 1697 1 hypothetical protein Morganella morganii S2
5 group_3558 NLDBIP_15690 5977 8943 -1 Phage-related minor tail protein Morganella morganii S4
6 group_126 NLDBIP_19845 63 1694 1 hypothetical protein Morganella morganii S4
7 group_126 NLDBIP_19875 63 1697 1 hypothetical protein Morganella morganii S4
8 group_3558 LHKJJB_16150 107743 110709 1 Phage-related minor tail protein Morganella morganii S3
9 group_126 LHKJJB_19815 1151 2782 -1 hypothetical protein Morganella morganii S3
10 group_126 LHKJJB_19840 63 1697 1 hypothetical protein Morganella morganii S3
11 group_126 HKOGLL_06005 249988 252912 1 Phage tail length tape-measure protein 1 Morganella morganii S5
12 group_3558 HKOGLL_15270 106955 109921 1 Phage-related minor tail protein Morganella morganii S5
13 group_126 F4V73_RS02200 462628 465501 1 phage tail tape measure protein Morganella psychrotolerans
14 group_4243 F4V73_RS18185 79344 83390 -1 tape measure protein Morganella psychrotolerans
15 group_126 PMI_RS02570 562176 565115 1 phage tail tape measure protein Proteus mirabilis HI4320
16 group_105 PMI_RS04590 1013533 1016808 1 phage tail tape measure protein Proteus mirabilis HI4320