PF09297


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF09297, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF09297
Description NADH pyrophosphatase zinc ribbon domain

Occurence in the database

PF09297 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2299 FBDBKF_17675 31417 32199 1 nudC NAD(+) diphosphatase Morganella morganii S1
1 group_2299 EHELCC_18160 30793 31575 1 nudC NAD(+) diphosphatase Morganella morganii S2
2 group_2299 NLDBIP_17990 7162 7944 -1 nudC NAD(+) diphosphatase Morganella morganii S4
3 group_2299 LHKJJB_18185 7162 7944 -1 nudC NAD(+) diphosphatase Morganella morganii S3
4 group_2299 HKOGLL_18015 30793 31575 1 nudC NAD(+) diphosphatase Morganella morganii S5
5 group_2299 F4V73_RS15055 250083 250865 1 nudC NAD(+) diphosphatase Morganella psychrotolerans
6 group_2299 PMI_RS13705 3044807 3045592 -1 nudC NAD(+) diphosphatase Proteus mirabilis HI4320