PF09163


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF09163, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF09163
Description Formate dehydrogenase N, transmembrane

Occurence in the database

PF09163 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_71 FBDBKF_08055 146934 147824 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S1
1 group_71 FBDBKF_16125 15718 16659 1 fdxH formate dehydrogenase subunit beta Morganella morganii S1
2 group_71 EHELCC_13885 121128 122018 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S2
3 group_71 EHELCC_16160 15718 16659 1 fdxH formate dehydrogenase subunit beta Morganella morganii S2
4 group_71 NLDBIP_14330 142003 142893 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S4
5 group_71 NLDBIP_17180 45511 46452 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S4
6 group_71 LHKJJB_08520 16856 17746 1 fdxH formate dehydrogenase subunit beta Morganella morganii S3
7 group_71 LHKJJB_17100 48613 49554 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S3
8 group_71 HKOGLL_08070 16856 17746 1 fdxH formate dehydrogenase subunit beta Morganella morganii S5
9 group_71 HKOGLL_16740 15718 16659 1 fdxH formate dehydrogenase subunit beta Morganella morganii S5
10 group_71 F4V73_RS12940 198029 198922 1 fdxH formate dehydrogenase subunit beta Morganella psychrotolerans
11 group_71 F4V73_RS17490 129541 130482 -1 fdxH formate dehydrogenase subunit beta Morganella psychrotolerans
12 group_71 PMI_RS15390 3419073 3420011 -1 fdxH formate dehydrogenase subunit beta Proteus mirabilis HI4320