PF08345


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08345, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08345
Description Flagellar M-ring protein C-terminal

Occurence in the database

PF08345 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_451 FBDBKF_00590 97151 98857 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S1
1 group_451 EHELCC_00955 210011 211717 -1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S2
2 group_451 NLDBIP_02505 468419 470125 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S4
3 group_451 LHKJJB_04020 75660 77366 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S3
4 group_451 HKOGLL_03025 210216 211922 -1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella morganii S5
5 group_451 F4V73_RS06600 1374065 1375774 1 fliF flagellar basal-body MS-ring/collar protein FliF Morganella psychrotolerans
6 group_451 PMI_RS07960 1743252 1744973 1 fliF flagellar basal-body MS-ring/collar protein FliF Proteus mirabilis HI4320