PF08335


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08335, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08335
Description GlnD PII-uridylyltransferase

Occurence in the database

PF08335 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1064 FBDBKF_06030 30838 33492 1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S1
1 group_1117 FBDBKF_06370 107379 110207 -1 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase Morganella morganii S1
2 group_1064 EHELCC_09075 31410 34064 1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S2
3 group_1117 EHELCC_09415 107951 110779 -1 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase Morganella morganii S2
4 group_1064 NLDBIP_09455 31410 34064 1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S4
5 group_1117 NLDBIP_09795 107951 110779 -1 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase Morganella morganii S4
6 group_1117 LHKJJB_07960 106459 109287 1 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase Morganella morganii S3
7 group_1064 LHKJJB_08300 183174 185828 -1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S3
8 group_1117 HKOGLL_07510 106459 109287 1 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase Morganella morganii S5
9 group_1064 HKOGLL_07850 183174 185828 -1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella morganii S5
10 group_1117 F4V73_RS15555 103848 106676 1 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase Morganella psychrotolerans
11 group_1064 F4V73_RS15875 180413 183067 -1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Morganella psychrotolerans
12 group_1064 PMI_RS11295 2485854 2488499 1 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD Proteus mirabilis HI4320
13 group_1117 PMI_RS11665 2577609 2580443 -1 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase Proteus mirabilis HI4320