Orthogroup:group_1179


Homologs in group_1179

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06800 FBDBKF_06800 Morganella morganii S1 sanA outer membrane permeability protein SanA
EHELCC_04170 EHELCC_04170 Morganella morganii S2 sanA outer membrane permeability protein SanA
NLDBIP_04170 NLDBIP_04170 Morganella morganii S4 sanA outer membrane permeability protein SanA
LHKJJB_10000 LHKJJB_10000 Morganella morganii S3 sanA outer membrane permeability protein SanA
HKOGLL_08975 HKOGLL_08975 Morganella morganii S5 sanA outer membrane permeability protein SanA
F4V73_RS00940 F4V73_RS00940 Morganella psychrotolerans sanA outer membrane permeability protein SanA
PMI_RS03160 PMI_RS03160 Proteus mirabilis HI4320 sanA outer membrane permeability protein SanA

Distribution of group_1179 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1179 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1179

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1179.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sanA 7

Product

# Product Occurence
1 outer membrane permeability protein SanA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2949 7 M Cell wall/membrane/envelope biogenesis (M) Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03748 7 SanA protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02698 7 DUF218 domain

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
Protein SanA 4
Protein SanA homolog 1
Uncharacterized protein YgjQ 1

Protein length

Min length 241
Max length 260
Mean length (sd) 256.1 (7.3)
Median length 260.0

Protein length distribution