PF08020


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF08020, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF08020
Description Protein of unknown function (DUF1706)

Occurence in the database

PF08020 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3113 FBDBKF_19735 11265 11783 -1 dfsB DUF1706 domain-containing protein Morganella morganii S1
1 group_3113 EHELCC_10830 205034 205552 -1 dfsB DUF1706 domain-containing protein Morganella morganii S2
2 group_3113 NLDBIP_11175 183305 183823 -1 dfsB DUF1706 domain-containing protein Morganella morganii S4
3 group_3113 LHKJJB_10180 7705 8223 1 dfsB DUF1706 domain-containing protein Morganella morganii S3
4 group_3113 HKOGLL_16345 7714 8232 1 dfsB DUF1706 domain-containing protein Morganella morganii S5
5 group_3113 PMI_RS12975 2878000 2878518 1 ClbS/DfsB family four-helix bundle protein Proteus mirabilis HI4320