Homologs in group_3113

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19735 FBDBKF_19735 100.0 Morganella morganii S1 dfsB DUF1706 domain-containing protein
EHELCC_10830 EHELCC_10830 100.0 Morganella morganii S2 dfsB DUF1706 domain-containing protein
NLDBIP_11175 NLDBIP_11175 100.0 Morganella morganii S4 dfsB DUF1706 domain-containing protein
LHKJJB_10180 LHKJJB_10180 100.0 Morganella morganii S3 dfsB DUF1706 domain-containing protein
HKOGLL_16345 HKOGLL_16345 100.0 Morganella morganii S5 dfsB DUF1706 domain-containing protein

Distribution of the homologs in the orthogroup group_3113

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3113

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q03036 1.83e-17 78 34 2 141 1 IRC4 Uncharacterized protein IRC4 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12975
Feature type CDS
Gene -
Product ClbS/DfsB family four-helix bundle protein
Location 2878000 - 2878518 (strand: 1)
Length 519 (nucleotides) / 172 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3113
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF08020 Protein of unknown function (DUF1706)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4283 General function prediction only (R) R Uncharacterized conserved protein DfsB/IRC4, DUF1706 (PF08020) domain

Protein Sequence

MSVPQTKAELLLAIDKSFSKLISYLNAIPPEMTSDNSMDGHAKGTKISVHDLVSYLLGWNALVVKWITFDAKGLPVDFPETGYKWNQLSLLAQKFYSDYSELSYELLVAELQAVKNEVVKLIDERTDDILYGRLWYTKWTMGRMISFNTSSPYANANGRLRKWAKNNKISLK

Flanking regions ( +/- flanking 50bp)

ACCATACAATGCATTTATGGTGTCTTATTTTAAATAAGAGGAAATTCTTCATGAGTGTGCCACAAACAAAAGCTGAGCTGCTTTTAGCTATTGATAAAAGTTTTAGTAAATTAATTAGTTACCTCAACGCAATCCCGCCAGAAATGACTTCAGATAACTCAATGGATGGACACGCCAAAGGAACGAAGATAAGTGTTCATGACCTTGTTTCATATCTGCTTGGATGGAATGCTCTTGTTGTAAAGTGGATCACTTTTGATGCTAAAGGTCTGCCTGTCGATTTTCCGGAAACTGGCTATAAATGGAATCAACTTAGTCTTCTTGCTCAAAAATTTTACTCAGATTACAGTGAGTTAAGTTATGAATTGTTAGTAGCTGAACTTCAGGCTGTAAAAAATGAAGTTGTGAAACTTATTGATGAGCGTACCGATGATATTTTGTATGGAAGACTATGGTACACAAAATGGACGATGGGGAGAATGATCTCATTTAACACATCTTCGCCTTACGCCAACGCTAATGGAAGATTAAGAAAGTGGGCAAAAAACAATAAGATCAGTTTAAAGTAAATATCAGAGTGAAATTATATGTACGAAAATATCTCTATGCCCATATCGTT