PF07947


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07947, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07947
Description YhhN family

Occurence in the database

PF07947 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_770 FBDBKF_03550 113610 114242 1 yhhN Uncharacterized membrane protein YhhN Morganella morganii S1
1 group_770 EHELCC_06985 132861 133493 -1 yhhN Uncharacterized membrane protein YhhN Morganella morganii S2
2 group_770 NLDBIP_07310 132734 133366 -1 yhhN Uncharacterized membrane protein YhhN Morganella morganii S4
3 group_770 LHKJJB_06845 96480 97112 -1 yhhN Uncharacterized membrane protein YhhN Morganella morganii S3
4 group_770 HKOGLL_04085 136275 136907 1 yhhN Uncharacterized membrane protein YhhN Morganella morganii S5
5 group_770 F4V73_RS11350 412989 413621 -1 lysoplasmalogenase family protein Morganella psychrotolerans
6 group_770 PMI_RS17920 3939930 3940556 -1 lysoplasmalogenase Proteus mirabilis HI4320