Orthogroup:group_840


Homologs in group_840

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04235 FBDBKF_04235 Morganella morganii S1 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
EHELCC_05525 EHELCC_05525 Morganella morganii S2 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
NLDBIP_05845 NLDBIP_05845 Morganella morganii S4 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
LHKJJB_02725 LHKJJB_02725 Morganella morganii S3 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
HKOGLL_06200 HKOGLL_06200 Morganella morganii S5 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
F4V73_RS08685 F4V73_RS08685 Morganella psychrotolerans aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type
PMI_RS10085 PMI_RS10085 Proteus mirabilis HI4320 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type

Distribution of group_840 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_840 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_840

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_840.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 aceE 7

Product

# Product Occurence
1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2609 7 C Energy production and conversion (C) Pyruvate dehydrogenase complex, dehydrogenase (E1) component

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00456 7 Transketolase, thiamine diphosphate binding domain
PF17831 7 Pyruvate dehydrogenase E1 component middle domain
PF22613 7 Transketolase-like TK C-terminal domain

Annotations of the 37 SwissProt hits

Annotation Number of occurrences
Apulose-4-phosphate transketolase subunit A 1
Probable transketolase 1
Putative transketolase N-terminal section 1
Pyruvate dehydrogenase E1 component 12
Pyruvate dehydrogenase E1 component (Fragment) 1
Transketolase 13
Transketolase 1 2
Transketolase 2 1
Transketolase, chromosomal 1
Transketolase, plasmid 1
Transketolase-like protein 2 3

Protein length

Min length 887
Max length 888
Mean length (sd) 887.1 (0.4)
Median length 887.0

Protein length distribution