PF07813


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07813, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07813
Description LTXXQ motif family protein

Occurence in the database

PF07813 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1771 FBDBKF_12325 128792 129289 -1 cpxP Periplasmic chaperone Spy, Spy/CpxP family Morganella morganii S1
1 group_1771 EHELCC_13980 5416 5913 1 cpxP Periplasmic chaperone Spy, Spy/CpxP family Morganella morganii S2
2 group_1771 NLDBIP_15075 9353 9850 1 cpxP Periplasmic chaperone Spy, Spy/CpxP family Morganella morganii S4
3 group_1771 LHKJJB_15535 128792 129289 -1 cpxP Periplasmic chaperone Spy, Spy/CpxP family Morganella morganii S3
4 group_1771 HKOGLL_14655 115455 115952 -1 cpxP Periplasmic chaperone Spy, Spy/CpxP family Morganella morganii S5
5 group_1771 F4V73_RS17155 63237 63746 -1 Spy/CpxP family protein refolding chaperone Morganella psychrotolerans
6 group_1771 PMI_RS15825 3514636 3515202 1 cpxP cell-envelope stress modulator CpxP Proteus mirabilis HI4320