PF07450


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07450, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07450
Description Formate hydrogenlyase maturation protein HycH

Occurence in the database

PF07450 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_789 FBDBKF_03700 142670 143104 -1 hycH Formate hydrogenlyase maturation protein HycH Morganella morganii S1
1 group_789 EHELCC_06835 103999 104433 1 hycH Formate hydrogenlyase maturation protein HycH Morganella morganii S2
2 group_789 NLDBIP_07160 103872 104306 1 hycH Formate hydrogenlyase maturation protein HycH Morganella morganii S4
3 group_789 LHKJJB_06695 67618 68052 1 hycH Formate hydrogenlyase maturation protein HycH Morganella morganii S3
4 group_789 HKOGLL_04235 165335 165769 -1 hycH Formate hydrogenlyase maturation protein HycH Morganella morganii S5
5 group_789 F4V73_RS11170 374332 374766 1 formate hydrogenlyase maturation HycH family protein Morganella psychrotolerans
6 group_789 PMI_RS12455 2762049 2762459 -1 formate hydrogenlyase maturation HycH family protein Proteus mirabilis HI4320