PF07201


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07201, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07201
Description HrpJ-like domain

Occurence in the database

PF07201 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1461 FBDBKF_09345 100286 101338 -1 sctW type III secretion system gatekeeper subunit SctW Morganella morganii S1
1 group_1461 EHELCC_10065 44766 45818 1 sctW type III secretion system gatekeeper subunit SctW Morganella morganii S2
2 group_1461 NLDBIP_10410 23037 24089 1 sctW type III secretion system gatekeeper subunit SctW Morganella morganii S4
3 group_1461 LHKJJB_10945 167439 168491 -1 sctW type III secretion system gatekeeper subunit SctW Morganella morganii S3
4 group_1461 HKOGLL_14005 100740 101792 -1 sctW type III secretion system gatekeeper subunit SctW Morganella morganii S5
5 group_1461 F4V73_RS10620 253889 254941 1 sctW type III secretion system gatekeeper subunit SctW Morganella psychrotolerans
6 group_1461 PMI_RS13280 2946918 2947994 -1 sctW type III secretion system gatekeeper subunit SctW Proteus mirabilis HI4320