Homologs in group_1514

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09345 FBDBKF_09345 100.0 Morganella morganii S1 sctW type III secretion system gatekeeper subunit SctW
NLDBIP_10410 NLDBIP_10410 100.0 Morganella morganii S4 sctW type III secretion system gatekeeper subunit SctW
LHKJJB_10945 LHKJJB_10945 100.0 Morganella morganii S3 sctW type III secretion system gatekeeper subunit SctW
HKOGLL_14005 HKOGLL_14005 100.0 Morganella morganii S5 sctW type III secretion system gatekeeper subunit SctW
F4V73_RS10620 F4V73_RS10620 73.4 Morganella psychrotolerans sctW type III secretion system gatekeeper subunit SctW
PMI_RS13280 PMI_RS13280 34.7 Proteus mirabilis HI4320 sctW type III secretion system gatekeeper subunit SctW

Distribution of the homologs in the orthogroup group_1514

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1514

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q04640 3.3e-19 90 25 9 316 1 mxiC Protein MxiC Shigella flexneri
P35671 2.2e-17 85 28 4 307 4 invE Invasion protein InvE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q56052 2.2e-17 85 28 4 307 3 invE Invasion protein InvE Salmonella typhi

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_10065
Feature type CDS
Gene sctW
Product type III secretion system gatekeeper subunit SctW
Location 44766 - 45818 (strand: 1)
Length 1053 (nucleotides) / 350 (amino acids)
In genomic island -

Contig

Accession ZDB_219
Length 213167 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1514
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07201 HrpJ-like domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22511 type III secretion system protein - -

Protein Sequence

MINGLPGAPVFSPFAAPQKQQNNAAAEQRPAENQTENHAEQMMDVMDDMAMALSQFNRRQYGKEDHISQLPASEQKNSAEGAETKLDRVVKWFAASGRSVREFLDYVRNLFPDPSDYVMALRSLLRKLPFSAEEAAEIDAEIEQLLHGEFAQETRAGINIALKIRQYAPVTQLDCAQLRMVYRSYISWKFDILYLWKVWLEQYRKSRVRSLLCYVRDSLVCDMAAALPSCSHHSEFGELTARLHTLNQLISLNDMFHQKITSLNCAEPVLADEQRLNQLLISGLGDAEAFQSETESLLAAAENDKNRPLILQRLIVIFGEIPDVLFLQEAGKEQVVSFLKALMSKTINIL

Flanking regions ( +/- flanking 50bp)

GAATAAACAAGGTATTAAGATGATTCAAAAACTGAAGCAGGACTATTGATATGATAAATGGTTTACCCGGCGCACCGGTGTTCAGTCCGTTTGCGGCACCACAGAAACAGCAGAATAATGCTGCAGCAGAACAGCGCCCGGCGGAAAACCAGACGGAAAACCATGCCGAGCAGATGATGGATGTAATGGATGATATGGCCATGGCACTGTCACAATTTAACCGGCGGCAGTACGGAAAAGAGGATCACATCAGCCAGTTACCGGCATCAGAGCAGAAAAACAGTGCTGAGGGTGCGGAAACAAAACTGGACCGGGTCGTTAAGTGGTTTGCTGCTTCCGGGCGCTCAGTTCGTGAGTTTCTCGATTATGTGCGCAATTTATTTCCGGATCCCAGTGATTATGTCATGGCACTGCGTTCCCTGTTGCGCAAACTGCCGTTTTCTGCGGAGGAAGCCGCCGAAATTGATGCGGAAATTGAGCAGTTACTCCACGGAGAATTTGCGCAGGAAACCCGCGCAGGGATCAATATCGCACTGAAAATCCGCCAGTATGCGCCGGTAACACAACTGGATTGTGCGCAGTTGAGAATGGTATACCGCAGTTATATCAGCTGGAAATTCGACATACTGTATCTGTGGAAAGTGTGGCTGGAGCAGTACCGGAAAAGCCGGGTCAGAAGCCTGCTGTGTTATGTCCGTGACTCGCTGGTGTGTGACATGGCGGCAGCACTGCCCAGTTGCAGCCATCACAGTGAGTTCGGGGAACTGACAGCCCGTCTGCATACCCTGAATCAGCTGATTTCCCTGAATGATATGTTTCATCAGAAAATTACGTCTCTGAACTGCGCGGAACCGGTACTGGCGGATGAGCAGCGGCTGAACCAGCTGCTGATTTCTGGGCTGGGTGACGCGGAAGCATTTCAGTCAGAAACAGAATCGTTACTGGCGGCGGCAGAAAATGACAAAAACAGACCGCTTATTTTACAGCGCCTGATTGTGATTTTTGGTGAGATACCGGATGTCCTTTTTCTGCAGGAGGCAGGCAAAGAGCAGGTGGTTTCTTTTCTGAAAGCCCTTATGAGCAAAACTATTAATATCTTATAACTTTCACCGGCAATGGATTGCTATGCTGACAACTTTTATTAATGCGATCA