PF06965


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06965, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06965
Description Na+/H+ antiporter 1

Occurence in the database

PF06965 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1134 FBDBKF_06470 133013 134191 -1 nhaA Na+/H+ antiporter NhaA Morganella morganii S1
1 group_1134 EHELCC_09515 133585 134763 -1 nhaA Na+/H+ antiporter NhaA Morganella morganii S2
2 group_1134 NLDBIP_09895 133585 134763 -1 nhaA Na+/H+ antiporter NhaA Morganella morganii S4
3 group_1134 LHKJJB_07860 82475 83653 1 nhaA Na+/H+ antiporter NhaA Morganella morganii S3
4 group_1134 HKOGLL_07410 82475 83653 1 nhaA Na+/H+ antiporter NhaA Morganella morganii S5
5 group_1134 F4V73_RS15455 79393 80571 1 nhaA Na+/H+ antiporter NhaA Morganella psychrotolerans
6 group_1134 PMI_RS00055 21812 22990 1 nhaA Na+/H+ antiporter NhaA Proteus mirabilis HI4320