PF06899


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06899, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06899
Description WzyE protein, O-antigen assembly polymerase

Occurence in the database

PF06899 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1338 FBDBKF_08270 32515 33870 1 wzyE ECA oligosaccharide polymerase Morganella morganii S1
1 group_1338 EHELCC_13255 129855 131210 -1 wzyE ECA oligosaccharide polymerase Morganella morganii S2
2 group_1338 NLDBIP_13595 129855 131210 -1 wzyE ECA oligosaccharide polymerase Morganella morganii S4
3 group_1338 LHKJJB_12960 31233 32588 1 wzyE ECA oligosaccharide polymerase Morganella morganii S3
4 group_1338 HKOGLL_12070 129855 131210 -1 wzyE ECA oligosaccharide polymerase Morganella morganii S5
5 group_1338 F4V73_RS18820 33673 35025 1 wzyE ECA oligosaccharide polymerase Morganella psychrotolerans
6 group_1338 PMI_RS16530 3645912 3647276 1 wzyE ECA oligosaccharide polymerase Proteus mirabilis HI4320