PF06832
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF06832
Protein list: lists the 12 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
External link |
PF06832 |
Description |
Penicillin-Binding Protein C-terminus Family |
Occurence in the database
PF06832 is associated with 12 different
proteins
|
The 12 proteins are classified into 2 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_593 |
FBDBKF_01085 |
197371 |
199680 |
-1 |
pbpC |
peptidoglycan glycosyltransferase PbpC |
Morganella morganii S1 |
1 |
group_3575 |
FBDBKF_19315 |
15087 |
17447 |
1 |
pbpC |
penicillin-binding protein 1C |
Morganella morganii S1 |
2 |
group_593 |
EHELCC_00460 |
109188 |
111497 |
1 |
pbpC |
peptidoglycan glycosyltransferase PbpC |
Morganella morganii S2 |
3 |
group_3575 |
EHELCC_07600 |
262178 |
264538 |
1 |
pbpC |
penicillin-binding protein 1C |
Morganella morganii S2 |
4 |
group_593 |
NLDBIP_03000 |
568639 |
570948 |
-1 |
pbpC |
peptidoglycan glycosyltransferase PbpC |
Morganella morganii S4 |
5 |
group_3575 |
NLDBIP_07925 |
262051 |
264411 |
1 |
pbpC |
penicillin-binding protein 1C |
Morganella morganii S4 |
6 |
group_593 |
LHKJJB_04515 |
175880 |
178189 |
-1 |
pbpC |
peptidoglycan glycosyltransferase PbpC |
Morganella morganii S3 |
7 |
group_3575 |
LHKJJB_07460 |
225797 |
228157 |
1 |
pbpC |
penicillin-binding protein 1C |
Morganella morganii S3 |
8 |
group_593 |
HKOGLL_02530 |
109393 |
111702 |
1 |
pbpC |
peptidoglycan glycosyltransferase PbpC |
Morganella morganii S5 |
9 |
group_3575 |
HKOGLL_03470 |
5230 |
7590 |
-1 |
pbpC |
penicillin-binding protein 1C |
Morganella morganii S5 |
10 |
group_593 |
F4V73_RS07155 |
1485243 |
1487552 |
-1 |
pbpC |
peptidoglycan glycosyltransferase PbpC |
Morganella psychrotolerans |
11 |
group_593 |
PMI_RS09130 |
1987285 |
1989606 |
-1 |
pbpC |
peptidoglycan glycosyltransferase PbpC |
Proteus mirabilis HI4320 |