PF06779


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06779, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06779
Description Uncharacterised MFS-type transporter YbfB

Occurence in the database

PF06779 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1176 FBDBKF_06775 18920 20089 1 MFS transporter Morganella morganii S1
1 group_1176 EHELCC_04195 166097 167266 -1 MFS transporter Morganella morganii S2
2 group_1176 NLDBIP_04195 165893 167062 -1 MFS transporter Morganella morganii S4
3 group_1176 LHKJJB_10025 166007 167176 -1 MFS transporter Morganella morganii S3
4 group_1176 HKOGLL_08950 23876 25045 1 MFS transporter Morganella morganii S5
5 group_1176 F4V73_RS00920 195549 196694 1 YbfB/YjiJ family MFS transporter Morganella psychrotolerans
6 group_1176 PMI_RS03145 693932 695101 1 YbfB/YjiJ family MFS transporter Proteus mirabilis HI4320