PF06508


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF06508, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF06508
Description Queuosine biosynthesis protein QueC

Occurence in the database

PF06508 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2118 FBDBKF_15910 32767 33465 -1 queC 7-cyano-7-deazaguanine synthase QueC Morganella morganii S1
1 group_2118 EHELCC_18510 20206 20904 -1 queC 7-cyano-7-deazaguanine synthase QueC Morganella morganii S2
2 group_2118 NLDBIP_17345 20206 20904 -1 queC 7-cyano-7-deazaguanine synthase QueC Morganella morganii S4
3 group_2118 LHKJJB_17315 35284 35982 1 queC 7-cyano-7-deazaguanine synthase QueC Morganella morganii S3
4 group_2118 HKOGLL_17080 20206 20904 -1 queC 7-cyano-7-deazaguanine synthase QueC Morganella morganii S5
5 group_2118 F4V73_RS16400 97095 97793 1 queC 7-cyano-7-deazaguanine synthase QueC Morganella psychrotolerans
6 group_2118 PMI_RS00590 152136 152834 -1 queC 7-cyano-7-deazaguanine synthase QueC Proteus mirabilis HI4320