PF05957


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05957, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05957
Description DUF883 N-terminal domain

Occurence in the database

PF05957 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_700 FBDBKF_03015 6620 6922 1 elaB DUF883 domain-containing protein Morganella morganii S1
1 group_700 EHELCC_07520 240181 240483 -1 elaB DUF883 domain-containing protein Morganella morganii S2
2 group_700 NLDBIP_07845 240054 240356 -1 elaB DUF883 domain-containing protein Morganella morganii S4
3 group_700 LHKJJB_07380 203800 204102 -1 elaB DUF883 domain-containing protein Morganella morganii S3
4 group_700 HKOGLL_03550 29285 29587 1 elaB DUF883 domain-containing protein Morganella morganii S5
5 group_700 F4V73_RS11900 532727 533029 -1 YqjD family protein Morganella psychrotolerans
6 group_700 PMI_RS18405 4037003 4037308 -1 YqjD family protein Proteus mirabilis HI4320