PF05437


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05437, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05437
Description Branched-chain amino acid transport protein (AzlD)

Occurence in the database

PF05437 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2578 FBDBKF_02835 262335 262646 1 azlD2 Branched-chain amino acid transport protein Morganella morganii S1
1 group_2240 FBDBKF_17150 14953 15279 -1 azlD AzlD domain-containing protein Morganella morganii S1
2 group_2240 EHELCC_01740 340222 340548 1 azlD AzlD domain-containing protein Morganella morganii S2
3 group_2578 EHELCC_03305 650155 650466 1 azlD2 Branched-chain amino acid transport protein Morganella morganii S2
4 group_2578 NLDBIP_00155 29670 29981 -1 azlD2 Branched-chain amino acid transport protein Morganella morganii S4
5 group_2240 NLDBIP_01720 339588 339914 -1 azlD AzlD domain-containing protein Morganella morganii S4
6 group_2240 LHKJJB_00315 52771 53097 1 azlD AzlD domain-containing protein Morganella morganii S3
7 group_2578 LHKJJB_01880 362704 363015 1 azlD2 Branched-chain amino acid transport protein Morganella morganii S3
8 group_2240 HKOGLL_00355 58282 58608 1 azlD AzlD domain-containing protein Morganella morganii S5
9 group_2578 HKOGLL_01920 368215 368526 1 azlD2 Branched-chain amino acid transport protein Morganella morganii S5
10 group_2578 F4V73_RS05275 1122324 1122635 1 AzlD domain-containing protein Morganella psychrotolerans
11 group_2240 F4V73_RS05905 1258871 1259197 -1 AzlD domain-containing protein Morganella psychrotolerans
12 group_2240 PMI_RS08310 1815542 1815871 -1 AzlD domain-containing protein Proteus mirabilis HI4320