Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF05362
Protein list: lists the 14 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.
Description
External link | PF05362 |
---|---|
Description | Lon protease (S16) C-terminal proteolytic domain |
Occurence in the database
PF05362 is associated with 14 different proteins |
The 14 proteins are classified into 2 different orthogroup(s) |
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_1316 | FBDBKF_07330 | 149616 | 151361 | -1 | lonB | putative ATP-dependent protease | Morganella morganii S1 |
1 | group_2151 | FBDBKF_15885 | 26863 | 29220 | 1 | lon | endopeptidase La | Morganella morganii S1 |
2 | group_1316 | EHELCC_03640 | 34825 | 36570 | 1 | lonB | putative ATP-dependent protease | Morganella morganii S2 |
3 | group_2151 | EHELCC_18485 | 14302 | 16659 | 1 | lon | endopeptidase La | Morganella morganii S2 |
4 | group_1316 | NLDBIP_03640 | 34621 | 36366 | 1 | lonB | putative ATP-dependent protease | Morganella morganii S4 |
5 | group_2151 | NLDBIP_17320 | 14302 | 16659 | 1 | lon | endopeptidase La | Morganella morganii S4 |
6 | group_1316 | LHKJJB_09470 | 34735 | 36480 | 1 | lonB | putative ATP-dependent protease | Morganella morganii S3 |
7 | group_2151 | LHKJJB_17340 | 39529 | 41886 | -1 | lon | endopeptidase La | Morganella morganii S3 |
8 | group_1316 | HKOGLL_09505 | 154572 | 156317 | -1 | lonB | putative ATP-dependent protease | Morganella morganii S5 |
9 | group_2151 | HKOGLL_17055 | 14302 | 16659 | 1 | lon | endopeptidase La | Morganella morganii S5 |
10 | group_1316 | F4V73_RS01515 | 338057 | 339802 | -1 | Lon protease family protein | Morganella psychrotolerans | |
11 | group_2151 | F4V73_RS16430 | 102410 | 104767 | -1 | lon | endopeptidase La | Morganella psychrotolerans |
12 | group_2151 | PMI_RS00565 | 145300 | 147654 | 1 | lon | endopeptidase La | Proteus mirabilis HI4320 |
13 | group_1316 | PMI_RS03845 | 870597 | 872339 | -1 | Lon protease family protein | Proteus mirabilis HI4320 |