PF05362


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05362, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05362
Description Lon protease (S16) C-terminal proteolytic domain

Occurence in the database

PF05362 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1258 FBDBKF_07330 149616 151361 -1 lonB putative ATP-dependent protease Morganella morganii S1
1 group_2113 FBDBKF_15885 26863 29220 1 lon endopeptidase La Morganella morganii S1
2 group_1258 EHELCC_03640 34825 36570 1 lonB putative ATP-dependent protease Morganella morganii S2
3 group_2113 EHELCC_18485 14302 16659 1 lon endopeptidase La Morganella morganii S2
4 group_1258 NLDBIP_03640 34621 36366 1 lonB putative ATP-dependent protease Morganella morganii S4
5 group_2113 NLDBIP_17320 14302 16659 1 lon endopeptidase La Morganella morganii S4
6 group_1258 LHKJJB_09470 34735 36480 1 lonB putative ATP-dependent protease Morganella morganii S3
7 group_2113 LHKJJB_17340 39529 41886 -1 lon endopeptidase La Morganella morganii S3
8 group_1258 HKOGLL_09505 154572 156317 -1 lonB putative ATP-dependent protease Morganella morganii S5
9 group_2113 HKOGLL_17055 14302 16659 1 lon endopeptidase La Morganella morganii S5
10 group_1258 F4V73_RS01515 338057 339802 -1 Lon protease family protein Morganella psychrotolerans
11 group_2113 F4V73_RS16430 102410 104767 -1 lon endopeptidase La Morganella psychrotolerans
12 group_2113 PMI_RS00565 145300 147654 1 lon endopeptidase La Proteus mirabilis HI4320
13 group_1258 PMI_RS03845 870597 872339 -1 Lon protease family protein Proteus mirabilis HI4320