PF05247


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05247, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05247
Description Flagellar transcriptional activator (FlhD)

Occurence in the database

PF05247 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_487 FBDBKF_00820 150144 150497 -1 flhD flagellar transcriptional regulator FlhD Morganella morganii S1
1 group_487 EHELCC_00725 158371 158724 1 flhD flagellar transcriptional regulator FlhD Morganella morganii S2
2 group_487 NLDBIP_02735 521412 521765 -1 flhD flagellar transcriptional regulator FlhD Morganella morganii S4
3 group_487 LHKJJB_04250 128653 129006 -1 flhD flagellar transcriptional regulator FlhD Morganella morganii S3
4 group_487 HKOGLL_02795 158576 158929 1 flhD flagellar transcriptional regulator FlhD Morganella morganii S5
5 group_487 F4V73_RS06815 1415072 1415425 -1 flhD flagellar transcriptional regulator FlhD Morganella psychrotolerans
6 group_487 PMI_RS08165 1784802 1785152 -1 flhD flagellar transcriptional regulator FlhD Proteus mirabilis HI4320
7 group_4554 PMI_RS12010 2654467 2654766 1 flagellar transcriptional regulator FlhD Proteus mirabilis HI4320