PF05130


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05130, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05130
Description FlgN protein

Occurence in the database

PF05130 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_476 FBDBKF_00730 121582 122022 1 flgN Flagellar biosynthesis/type III secretory pathway chaperone FlgN Morganella morganii S1
1 group_476 EHELCC_00815 186846 187286 -1 flgN Flagellar biosynthesis/type III secretory pathway chaperone FlgN Morganella morganii S2
2 group_476 NLDBIP_02645 492850 493290 1 flgN Flagellar biosynthesis/type III secretory pathway chaperone FlgN Morganella morganii S4
3 group_476 LHKJJB_04160 100091 100531 1 flgN Flagellar biosynthesis/type III secretory pathway chaperone FlgN Morganella morganii S3
4 group_476 HKOGLL_02885 187051 187491 -1 flgN Flagellar biosynthesis/type III secretory pathway chaperone FlgN Morganella morganii S5
5 group_476 F4V73_RS06740 1398564 1399004 1 flgN flagellar export chaperone FlgN Morganella psychrotolerans
6 group_476 PMI_RS08090 1766607 1767047 1 flgN flagellar export chaperone FlgN Proteus mirabilis HI4320