PF04960


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04960, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 19 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04960
Description Glutaminase

Occurence in the database

PF04960 is associated with 19 different proteins (see tab "Protein list" and "Profile")
The 19 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_97 FBDBKF_14310 63533 64540 1 glsA glutaminase A Morganella morganii S1
1 group_1994 FBDBKF_15010 13159 14109 1 glsB glutaminase B Morganella morganii S1
2 group_97 FBDBKF_15555 39432 40361 1 glsA glutaminase A Morganella morganii S1
3 group_97 EHELCC_07970 52445 53452 -1 glsA glutaminase A Morganella morganii S2
4 group_1994 EHELCC_11235 70797 71747 -1 glsB glutaminase B Morganella morganii S2
5 group_97 EHELCC_15915 38732 39661 1 glsA glutaminase A Morganella morganii S2
6 group_97 NLDBIP_08295 52445 53452 -1 glsA glutaminase A Morganella morganii S4
7 group_1994 NLDBIP_11580 70797 71747 -1 glsB glutaminase B Morganella morganii S4
8 group_97 NLDBIP_16455 41002 41931 -1 glsA glutaminase A Morganella morganii S4
9 group_97 LHKJJB_05970 203707 204714 1 glsA glutaminase A Morganella morganii S3
10 group_1994 LHKJJB_11440 70797 71747 -1 glsB glutaminase B Morganella morganii S3
11 group_97 LHKJJB_16350 38732 39661 1 glsA glutaminase A Morganella morganii S3
12 group_97 HKOGLL_04945 37036 38043 -1 glsA glutaminase A Morganella morganii S5
13 group_1994 HKOGLL_10050 70797 71747 -1 glsB glutaminase B Morganella morganii S5
14 group_97 HKOGLL_16120 38732 39661 1 glsA glutaminase A Morganella morganii S5
15 group_97 F4V73_RS02595 545861 546865 -1 glsA glutaminase A Morganella psychrotolerans
16 group_1994 F4V73_RS12440 71634 72560 -1 glsB glutaminase B Morganella psychrotolerans
17 group_97 F4V73_RS17595 155664 156593 -1 glsA glutaminase A Morganella psychrotolerans
18 group_1994 PMI_RS01570 380061 380987 1 glsB glutaminase B Proteus mirabilis HI4320