PF04883


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04883, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04883
Description Bacteriophage HK97-gp10, putative tail-component

Occurence in the database

PF04883 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_133 FBDBKF_18600 9998 10411 -1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S1
1 group_133 FBDBKF_19375 8668 9069 -1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S1
2 group_133 EHELCC_15175 9998 10411 -1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S2
3 group_133 EHELCC_19285 4334 4735 1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S2
4 group_133 NLDBIP_15705 9998 10411 -1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S4
5 group_133 NLDBIP_19415 4334 4735 1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S4
6 group_133 LHKJJB_16135 106275 106688 1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S3
7 group_133 LHKJJB_19390 8668 9069 -1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S3
8 group_133 HKOGLL_15255 105487 105900 1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S5
9 group_133 HKOGLL_19220 4334 4735 1 HK97-gp10 family putative phage morphogenesis protein Morganella morganii S5
10 group_133 PMI_RS04560 1010939 1011412 1 HK97 gp10 family phage protein Proteus mirabilis HI4320