PF04356


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04356, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04356
Description Protein of unknown function (DUF489)

Occurence in the database

PF04356 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1941 FBDBKF_14565 7421 8050 1 hflD high frequency lysogenization protein HflD Morganella morganii S1
1 group_1941 EHELCC_15370 37497 38126 1 hflD high frequency lysogenization protein HflD Morganella morganii S2
2 group_1941 NLDBIP_15900 37497 38126 1 hflD high frequency lysogenization protein HflD Morganella morganii S4
3 group_1941 LHKJJB_15940 78560 79189 -1 hflD high frequency lysogenization protein HflD Morganella morganii S3
4 group_1941 HKOGLL_15060 77772 78401 -1 hflD high frequency lysogenization protein HflD Morganella morganii S5
5 group_1941 F4V73_RS07360 1535657 1536286 1 hflD high frequency lysogenization protein HflD Morganella psychrotolerans
6 group_1941 PMI_RS04360 979921 980550 -1 hflD high frequency lysogenization protein HflD Proteus mirabilis HI4320