PF04204


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF04204, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF04204
Description Homoserine O-succinyltransferase

Occurence in the database

PF04204 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2412 FBDBKF_19490 378 1307 1 metA homoserine O-succinyltransferase Morganella morganii S1
1 group_2412 EHELCC_16435 378 1307 1 metA homoserine O-succinyltransferase Morganella morganii S2
2 group_2412 NLDBIP_16645 378 1307 1 metA homoserine O-succinyltransferase Morganella morganii S4
3 group_2412 LHKJJB_16825 67203 68132 -1 metA homoserine O-succinyltransferase Morganella morganii S3
4 group_2412 HKOGLL_18790 378 1307 1 metA homoserine O-succinyltransferase Morganella morganii S5
5 group_2412 F4V73_RS18635 73154 74083 -1 metA homoserine O-succinyltransferase Morganella psychrotolerans
6 group_2412 PMI_RS13630 3029131 3030060 1 metA homoserine O-succinyltransferase Proteus mirabilis HI4320