PF03922


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03922, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03922
Description OmpW family

Occurence in the database

PF03922 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_951 FBDBKF_05190 45480 46115 -1 ompW outer membrane protein OmpW Morganella morganii S1
1 group_951 EHELCC_12400 135379 136014 1 ompW outer membrane protein OmpW Morganella morganii S2
2 group_951 NLDBIP_12740 135334 135969 1 ompW outer membrane protein OmpW Morganella morganii S4
3 group_951 LHKJJB_12600 135379 136014 1 ompW outer membrane protein OmpW Morganella morganii S3
4 group_951 HKOGLL_11215 135379 136014 1 ompW outer membrane protein OmpW Morganella morganii S5
5 group_951 F4V73_RS05645 1200883 1201521 -1 ompW outer membrane protein OmpW Morganella psychrotolerans
6 group_951 PMI_RS06515 1429387 1430028 -1 ompW outer membrane protein OmpW Proteus mirabilis HI4320