PF03899


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03899, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03899
Description ATP synthase I chain

Occurence in the database

PF03899 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2065 FBDBKF_15460 18768 19145 1 atpI F0F1 ATP synthase subunit I Morganella morganii S1
1 group_2065 EHELCC_15820 18068 18445 1 atpI F0F1 ATP synthase subunit I Morganella morganii S2
2 group_2065 NLDBIP_16550 62218 62595 -1 atpI F0F1 ATP synthase subunit I Morganella morganii S4
3 group_2065 LHKJJB_16255 18068 18445 1 atpI F0F1 ATP synthase subunit I Morganella morganii S3
4 group_2065 HKOGLL_16025 18068 18445 1 atpI F0F1 ATP synthase subunit I Morganella morganii S5
5 group_2065 F4V73_RS17685 177998 178375 -1 atpI F0F1 ATP synthase subunit I Morganella psychrotolerans
6 group_2065 PMI_RS15140 3361417 3361794 1 atpI F0F1 ATP synthase subunit I Proteus mirabilis HI4320